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science

ModDNA toolkit builds programmable DNA up to 100 kb

A bioRxiv preprint describes ModDNA, a sequence-design and cloning toolkit for building custom DNA molecules up to 100 kilobases. The researchers used the constructs in single-molecule visualisation assays, including an assay of DNA loop extrusion by human condensin I.

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New fp-SMD method simulates the bead in optical-tweezer experiments

A bioRxiv preprint introduces fp-SMD, which models the optically trapped bead, linker and biomolecule together. The authors report that it reproduces a cholesterol–β-cyclodextrin rupture-force histogram and captures force-dependent changes in the molecule’s escape route.